USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9H4B7 USC-OGP 2-DE database:  Q9H4B7 Q9H4B7 General information about the entry View entry in simple text format Entry name Q9H4B7 Primary accession number Q9H4B7 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Tubulin beta-1 chain;. Gene name Name=TUBB1 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0374: pI=5.18; Mw=48891 SPOT OGP-0375: pI=5.07; Mw=48772 SPOT OGP-0377: pI=5.10; Mw=48653 SPOT OGP-0379: pI=5.14; Mw=48298 SPOT OGP-0389: pI=5.07; Mw=47479 PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0679: pI=5.11; Mw=50050 SPOT OGP-0681: pI=5.14; Mw=49554 SPOT OGP-0683: pI=5.06; Mw=48218 Cross-references UniProtKB/Swiss-Prot Q9H4B7; TBB1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TBB1_HUMAN Primary accession number Q9H4B7 Sequence was last modified on  March 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 137) Name and origin of the protein Description RecName: Full=Tubulin beta-1 chain; Gene name Name=TUBB1 Encoded on Name=TUBB1 Keywords Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Disease mutation; GTP-binding; Isopeptide bond; Microtubule; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AJ292757; CAC16605.1; -; mRNA EMBL AL109840; CAC09371.2; -; Genomic_DNA EMBL BC033679; AAH33679.1; -; mRNA CCDS CCDS13475.1; -; . RefSeq NP_110400.1; NM_030773.3; . UniGene Hs.303023; -; . ProteinModelPortal Q9H4B7; -; . SMR Q9H4B7; -; . BioGrid 123347; 68; . DIP DIP-42487N; -; . IntAct Q9H4B7; 28; . MINT MINT-1891365; -; . STRING 9606.ENSP00000217133; -; . BindingDB Q9H4B7; -; . ChEMBL CHEMBL1915; -; . DrugBank DB06772; Cabazitaxel; . DrugBank DB01394; Colchicine; . DrugBank DB05147; CYT997; . DrugBank DB01248; Docetaxel; . DrugBank DB04940; E7389; . DrugBank DB03010; Epothilone B; . DrugBank DB01873; Epothilone D; . DrugBank DB01229; Paclitaxel; . DrugBank DB00309; Vindesine; . DrugBank DB06042; ZEN-012; . iPTMnet Q9H4B7; -; . PhosphoSitePlus Q9H4B7; -; . BioMuta TUBB1; -; . DMDM 62903515; -; . OGP Q9H4B7; -; . EPD Q9H4B7; -; . MaxQB Q9H4B7; -; . PaxDb Q9H4B7; -; . PeptideAtlas Q9H4B7; -; . PRIDE Q9H4B7; -; . TopDownProteomics Q9H4B7; -; . DNASU 81027; -; . Ensembl ENST00000217133; ENSP00000217133; ENSG00000101162; . GeneID 81027; -; . KEGG hsa:81027; -; . UCSC uc002yak.3; human; . CTD 81027; -; . DisGeNET 81027; -; . GeneCards TUBB1; -; . HGNC HGNC:16257; TUBB1; . HPA CAB004286; -; . HPA HPA043640; -; . HPA HPA046280; -; . MalaCards TUBB1; -; . MIM 612901; gene; . MIM 613112; phenotype; . neXtProt NX_Q9H4B7; -; . OpenTargets ENSG00000101162; -; . Orphanet 140957; Autosomal dominant macrothrombocytopenia; . PharmGKB PA38100; -; . eggNOG KOG1375; Eukaryota; . eggNOG COG5023; LUCA; . GeneTree ENSGT00760000119061; -; . HOGENOM HOG000165710; -; . HOVERGEN HBG000089; -; . InParanoid Q9H4B7; -; . KO K07375; -; . OMA FDARNIM; -; . OrthoDB EOG091G06U2; -; . PhylomeDB Q9H4B7; -; . TreeFam TF300298; -; . Reactome R-HSA-1445148; Translocation of GLUT4 to the plasma membrane; . Reactome R-HSA-190840; Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane; . Reactome R-HSA-190861; Gap junction assembly; . Reactome R-HSA-2132295; MHC class II antigen presentation; . Reactome R-HSA-2467813; Separation of Sister Chromatids; . Reactome R-HSA-2500257; Resolution of Sister Chromatid Cohesion; . Reactome R-HSA-380320; Recruitment of NuMA to mitotic centrosomes; . Reactome R-HSA-389957; Prefoldin mediated transfer of substrate to CCT/TriC; . Reactome R-HSA-389960; Formation of tubulin folding intermediates by CCT/TriC; . Reactome R-HSA-389977; Post-chaperonin tubulin folding pathway; . Reactome R-HSA-437239; Recycling pathway of L1; . Reactome R-HSA-5610787; Hedgehog 'off' state; . Reactome R-HSA-5617833; Cilium Assembly; . Reactome R-HSA-5620924; Intraflagellar transport; . Reactome R-HSA-5626467; RHO GTPases activate IQGAPs; . Reactome R-HSA-5663220; RHO GTPases Activate Formins; . Reactome R-HSA-6807878; COPI-mediated anterograde transport; . Reactome R-HSA-6811434; COPI-dependent Golgi-to-ER retrograde traffic; . Reactome R-HSA-6811436; COPI-independent Golgi-to-ER retrograde traffic; . Reactome R-HSA-68877; Mitotic Prometaphase; . Reactome R-HSA-8852276; The role of GTSE1 in G2/M progression after G2 checkpoint; . Reactome R-HSA-983189; Kinesins; . SIGNOR Q9H4B7; -; . GeneWiki TUBB1; -; . GenomeRNAi 81027; -; . PRO PR:Q9H4B7; -; . Proteomes UP000005640; Chromosome 20; . Bgee ENSG00000101162; -; . CleanEx HS_TUBB1; -; . Genevisible Q9H4B7; HS; . GO GO:0005737; C:cytoplasm; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005874; C:microtubule; IEA:UniProtKB-KW; . GO GO:0015630; C:microtubule cytoskeleton; IDA:HPA; . GO GO:0005525; F:GTP binding; IEA:UniProtKB-KW; . GO GO:0003924; F:GTPase activity; IEA:InterPro; . GO GO:0005200; F:structural constituent of cytoskeleton; IEA:Ensembl; . GO GO:0051225; P:spindle assembly; IEA:Ensembl; . Gene3D 1.10.287.600; -; 1; . Gene3D 3.30.1330.20; -; 1; . Gene3D 3.40.50.1440; -; 1; . InterPro IPR013838; Beta-tubulin_BS; . InterPro IPR002453; Beta_tubulin; . InterPro IPR008280; Tub_FtsZ_C; . InterPro IPR000217; Tubulin; . InterPro IPR018316; Tubulin/FtsZ_2-layer-sand-dom; . InterPro IPR023123; Tubulin_C; . InterPro IPR017975; Tubulin_CS; . InterPro IPR003008; Tubulin_FtsZ_GTPase; . PANTHER PTHR11588; PTHR11588; 1; . Pfam PF00091; Tubulin; 1; . Pfam PF03953; Tubulin_C; 1; . PRINTS PR01163; BETATUBULIN; . PRINTS PR01161; TUBULIN; . SMART SM00864; Tubulin; 1; . SMART SM00865; Tubulin_C; 1; . SUPFAM SSF52490; SSF52490; 1; . SUPFAM SSF55307; SSF55307; 1; . PROSITE PS00227; TUBULIN; 1; . PROSITE PS00228; TUBULIN_B_AUTOREG; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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